Sunday, December 30, 2012

Genetics Population


Genetics Population

Data :
In a certain area there is bird population, amount: 3629 species,  which is found the following genotype distribution among the bird sampled : 1888 were BB, 1212 were Bb, and 529 werebb:
1.    Calculate the allele frequencies of B and b,
2.    Expected numbers of the three genotypic classes (assuming random mating).
3.    Using X2, determine whether or not this population is in Hardy-Weinberg equilibrium.

·        p to the frequency of the dominant allele : BB
·        q to the frequency of the recessive allele : bb

Ø  OBSERVED GENOTYPE FREQUENCIES
       BB(p2)         : 1888/3629 = 0.520
       Bb(2pq)         : 1212/3629 = 0.334
       bb(q2  )           :529/3629 = 0.146
Ø  ALLELE FREQUENCIES
-       Freq of B = p = p2 + 1/2 (2pq) = 0.520 + 1/2 (0.334) = 0.520  + 0.167  = 0.687
-       Freq of b = q = 1-p = 1 -  = 0.313.

Ø  EXPECTED GENOTYPE FREQUENCIES (assuming Hardy-Weinberg): IF population is in HWE, then we’d expected the following frequencies:
-       BB (p2) = (0.687)2 = 0.472
-       Bb (2pq) = 2 (0.687)(0.313) = 0.430
-       bb (q2) = (0.313)2 = 0.098
Ø  EXPECTED NUMBER OF INDIVIDUALS of EACH GENOTYPE:
-       # BB = 0.472 X 3629 = 1713
-       # Bb = 0.430 X 3629 = 1560
-       # bb = 0.098 X 3629 = 356


Genotype
Expected Numbers
Observed Numbers
BB
0.472 X 3629 = 1713
0.520 X 3629 = 1887.8
Bb
0.430 X 3629 = 1560
0.334 X 3629 = 1212
bb
0.098 X 3629 = 356
0.146 X 3629 = 529.8

X2 = [(1887.8 - 1713)2/ 1713] + [(1212 - 1560)2 / 1560] + [(529.8 - 356)2/ 356]
= 17.837 +85.661+84.849
= 188.347
X2(Calculated)>X2(table) [3.841, 1 df, 0.05 ls]
The critical chi-square value for 1 degree of freedom is 3.841.  Since 188.347is greater than this, we absolutely reject the null hypothesis that the population is in Hardy-Weinberg equilibrium.

Nb: kalo hasil X2kalian lebih kecil dari 3.841 berarti:
X2(calculated)<X2(table) [3.841, 1 df at 0.05 ls).
Therefore, fail to reject null hypothesis and conclude that the population is in HWE

No comments:

Post a Comment